Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943599.1_cds_XP_016486693.1_77510
CDS Infomation

[gene=LOC107806932] [db_xref=GeneID:107806932] [protein=two-component response regulator-like APRR3 isoform X2] [protein_id=XP_016486693.1] [location=join(72053..72077,72169..72299,72404..72544,72908..73019,73104..73452,73656..74322,74870..74956)] [gbkey=CDS]
Sequence

ATGTGCAAAAACATACCTGTTATAATGATGTCGTCCAAGGATTCCATTAGCACGGTCTTG
AAATGCATGGTTAAAGGAGCTTCCGACTTTCTTATGAAGCCTGTTAGGAAAAATGAGCTG
AGGAACCTGTGGCAGCATGTTTGGAGAAGAAAAACCCAAAGTGCTGGAAGCCGTCCTCAA
AATAAAATTGTTGAAAACCAGAAAGTAGCTGTGTCTGAGAACGAAGCAGCAAGTAATTAT
TCTAGCGACAATCTGGCTTCTATTCAAAGAGGAAATGACAAATCTAGTGATGCACAAGGC
ATTAAGGATATTAGATGTAGAGATGCTTCAAATATGTGCGATGATGAATGTCATGAAGAA
TGTGTTGAAGTGGTTGAGAGATCATTTATGCCGAAAAGTAAACCATTAGAAAACATGACT
AGCTCGGGAATAGGAACTTCTTCTTGCACTGGACCTTACAGCTCAGGTGCTATTAGTTCA
GAGGAAGGCTCTCTTTGTGAAAATGCTTGTGCTGATGATGAAGTTGATTGCCGGTTGAAT
GAACTCTATTCTGCACCTTGTACTGAAGCAGTTGACTTGATTGGGAAATTTGAAAATTGC
TTGGCTGATAACAGCCATTCTGATGAAAGAAAACAGAAATCAAATGTCGCTTCCCGGTTG
GGACTTTCTTTGAGAACATTTAATCCCAGTTGCTCAAACGATGACGGGTCCAGAGAGCAG
AACATGATAAGTCATTCAAAAGTATCCGCCTTTGCTAAATATGAAAATAAGAAGACAATA
CAATATCTTTTCTCTGGATTGACTAGCAATTCTGGTCCATTCAAGGAAGGCTCTAGTGCC
TCTACTTTGGAGCATGATGCTTCATTGACCGAGAGTGAGCAAAACGCAACAGCTCTGGTT
ATGCGCCAACCAGGAAATTGTAAAGCTGCAATATCGTCGGACAACCAACTACGCTTTATT
CCAGTAGAATCAGATTATCAACAAGTACAGAGTCCTAAATCACAATCTCCACTTCCAACA
AGTTCTTTGACTTATTCATCTTCCGAAGTACAAAATCTTGAGCACGACAAGCAGCCATTT
GATGATACTACAGTTCACTCTGAGGACAATGCGGAAGCAGCAGGTAACCAGAAGTTAGTA
GCTGAGAAAGAAAGAAATGATTCTGCAATTTGTGGATCTAGTGATTTGGGAAGTGGCTTA
ACAAATAAGCACAGTAGCTCTCGTTGCGGAAGTACTTCCAATGAAGCTATAGAAAGTTCC
CCAGCAGTTGCAAGTTCGGGGACAGATCCTGTTTCTGAGAGTGTGAACTACAATGACAAC
CTTCCTCATGATAGGACAAGAGCAGAGAATCATAACACCAGTCAAAGGGAAGCGGCACTC
GTGAAGTTTCGGTTAAAAAGGAAAGATAGATGCTTTGAGAAAAAGGTTCGATACCAAAGC
AGGAAAAGACTTGCAGAGCAGAGACCTCGAGTGAAAGGACAGTTTGTTCGTCAGCTGCAA
AACGAAAATTAG

Peptide Sequence

PEP ID

XP_016486693.1
PEP Infomation

PREDICTED: two-component response regulator-like APRR3 isoform X2 [Nicotiana tabacum]
Sequence

MCKNIPVIMMSSKDSISTVLKCMVKGASDFLMKPVRKNELRNLWQHVWRRKTQSAGSRPQ
NKIVENQKVAVSENEAASNYSSDNLASIQRGNDKSSDAQGIKDIRCRDASNMCDDECHEE
CVEVVERSFMPKSKPLENMTSSGIGTSSCTGPYSSGAISSEEGSLCENACADDEVDCRLN
ELYSAPCTEAVDLIGKFENCLADNSHSDERKQKSNVASRLGLSLRTFNPSCSNDDGSREQ
NMISHSKVSAFAKYENKKTIQYLFSGLTSNSGPFKEGSSASTLEHDASLTESEQNATALV
MRQPGNCKAAISSDNQLRFIPVESDYQQVQSPKSQSPLPTSSLTYSSSEVQNLEHDKQPF
DDTTVHSEDNAEAAGNQKLVAEKERNDSAICGSSDLGSGLTNKHSSSRCGSTSNEAIESS
PAVASSGTDPVSESVNYNDNLPHDRTRAENHNTSQREAALVKFRLKRKDRCFEKKVRYQS
RKRLAEQRPRVKGQFVRQLQNEN

Transcript Sequence

Gene sequence data has not been registered.